DatasetChronic fatigue syndrome__20002-both_sexes-1482
PhenotypeNoPhenotypeAvailable
Upregulated in classna_pos
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)0.5481578
Normalized Enrichment Score (NES)0.9971132
Nominal p-value0.537
FDR q-value0.85709643
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1JAK2293.3190.0561Yes
2PTPN11312.6070.0957Yes
3STAT21362.6010.1407Yes
4NFKBIA2702.2330.1721Yes
5HLA-B3252.1440.2063Yes
6CASP36371.7890.2199Yes
7TNFAIP26771.7540.2482Yes
8MT2A8821.5750.2642Yes
9PLSCR19021.5600.2902Yes
10RNF3111121.4210.3032Yes
11CMPK211631.3920.3246Yes
12TOR1B12411.3490.3437Yes
13HERC613061.3180.3630Yes
14CASP413411.2950.3837Yes
15LYSMD214831.2150.3969Yes
16NUP9315151.1860.4157Yes
17FCGR1A17031.0970.4243Yes
18MYD8818771.0160.4323Yes
19OAS219340.9900.4463Yes
20PSME119660.9770.4616Yes
21CIITA20250.9540.4749Yes
22MTHFD220310.9510.4911Yes
23LGALS3BP22180.8730.4959Yes
24IRF223100.8340.5053Yes
25NCOA324880.7690.5087Yes
26IRF725870.7320.5159Yes
27RBCK128030.6600.5153Yes
28IFI3529180.6330.5199Yes
29HLA-A31850.5700.5149Yes
30SP11031990.5660.5240Yes
31CXCL932480.5530.5309Yes
32PARP1432780.5460.5388Yes
33ST3GAL533400.5350.5447Yes
34BANK134390.5160.5482Yes
35TXNIP37080.4640.5412No
36IFI44L37530.4570.5467No
37ZNFX139870.4220.5409No
38UPP141560.3960.5384No
39DDX6042830.3800.5379No
40NLRC543620.3710.5400No
41SELP46150.3440.5318No
42PSMB947720.3280.5287No
43EIF4E351470.2930.5128No
44NOD152190.2860.5138No
45LAP352500.2830.5171No
46ITGB754920.2640.5081No
47DHX5856300.2540.5048No
48SAMHD157050.2480.5050No
49GZMA57830.2430.5049No
50GBP659190.2350.5014No
51TNFSF1059370.2340.5045No
52IFNAR260940.2260.4997No
53KLRK161130.2250.5026No
54XAF161180.2250.5063No
55CCL561990.2210.5057No
56GBP462590.2180.5062No
57IFIH162920.2160.5081No
58RSAD263750.2120.5072No
59PSME263850.2110.5104No
60RAPGEF671190.1780.4723No
61CFB71360.1770.4745No
62TAP171760.1750.4753No
63P2RY1472450.1730.4745No
64IRF574070.1670.4684No
65PARP1275740.1610.4619No
66PSMB1075880.1610.4639No
67SSPN76160.1600.4652No
68BPGM77210.1560.4621No
69SLAMF777220.1560.4648No
70SPPL2A77250.1560.4674No
71PNP77300.1560.4699No
72PNPT178560.1520.4655No
73LCP278650.1520.4677No
74IDO179980.1470.4629No
75CASP881970.1410.4542No
76EIF2AK282510.1390.4537No
77ICAM182560.1390.4559No
78MX182640.1380.4579No
79USP1883030.1370.4581No
80TRAFD184270.1340.4535No
81ISOC184450.1330.4549No
82GPR1885980.1290.4486No
83TRIM2588330.1240.4376No
84UBE2L690640.1180.4268No
85ADAR91360.1150.4248No
86CDKN1A91830.1140.4242No
87VAMP593340.1110.4177No
88SAMD9L94760.1080.4117No
89CFH94920.1070.4127No
90IL15RA95290.1070.4125No
91MX295770.1060.4117No
92TAPBP95920.1050.4128No
93CD3896070.1050.4138No
94SRI97130.1030.4097No
95PSMB897910.1010.4071No
96HIF1A98610.0990.4050No
97MARCHF198820.0990.4056No
98IFITM399430.0980.4039No
99OASL101200.0950.3957No
100VCAM1103810.0900.3827No
101CMTR1104180.0900.3822No
102PFKP106560.0850.3704No
103LATS2106700.0850.3711No
104TRIM14107630.0840.3674No
105CSF2RB108160.0820.3659No
106HELZ2109780.0800.3583No
107CASP1112020.0760.3471No
108TDRD7114370.0730.3352No
109ZBP1114880.0720.3336No
110IFITM2115670.0710.3305No
111CD69116320.0690.3281No
112BST2118690.0660.3160No
113IRF4120480.0630.3071No
114PLA2G4A122370.0610.2976No
115PTPN6123090.0600.2947No
116ISG20123870.0590.2914No
117RIPK2125590.0560.2827No
118IL10RA127500.0540.2730No
119OAS3127670.0530.2730No
120TRIM26128210.0530.2710No
121STAT4129390.0510.2653No
122CD40129520.0510.2655No
123HLA-G129880.0510.2644No
124SECTM1130890.0490.2597No
125ST8SIA4131210.0490.2588No
126FGL2131240.0490.2595No
127VAMP8131370.0480.2597No
128RIPK1132790.0470.2526No
129TRIM21134170.0450.2457No
130IL2RB134550.0440.2444No
131CD74135450.0430.2401No
132SOD2136300.0420.2361No
133IL4R137280.0410.2314No
134CASP7137510.0400.2309No
135IL15137780.0400.2301No
136HLA-DMA138410.0390.2273No
137PTPN2139090.0380.2242No
138IRF9140730.0350.2156No
139WARS1141770.0330.2104No
140BTG1143960.0220.1986No
141APOL6144490.0200.1960No
142HLA-DQA1144640.0190.1955No
143PSMA2144950.0160.1941No
144ISG15145250.0120.1927No
145MVP14593-0.0000.1889No
146OGFR14671-0.0000.1846No
147PTGS214745-0.0000.1805No
148PSMA314920-0.0000.1708No
149IL715039-0.0000.1641No
150NAMPT15086-0.0000.1615No
151CCL715157-0.0000.1576No
152CCL215158-0.0000.1576No
153NFKB115179-0.0000.1565No
154CD8615288-0.0000.1504No
155STAT115318-0.0000.1488No
156TNFAIP315390-0.0000.1448No
157IFIT315420-0.0000.1432No
158CD27415430-0.0000.1427No
159ARL4A15491-0.0000.1393No
160IRF115558-0.0000.1356No
161PSMB215595-0.0000.1336No
162GCH115732-0.0000.1260No
163EPSTI115759-0.0000.1245No
164IL615843-0.0000.1198No
165RTP415852-0.0000.1194No
166PIM115881-0.0000.1178No
167IFI4415898-0.0000.1169No
168PML15974-0.0000.1127No
169IRF815981-0.0000.1124No
170XCL116022-0.0000.1101No
171SERPING116156-0.0000.1027No
172ARID5B16171-0.0000.1019No
173SLC25A2816257-0.0000.0971No
174AUTS216322-0.0000.0935No
175C1R16355-0.0000.0917No
176IFI2716583-0.0000.0790No
177B2M16617-0.0000.0771No
178BATF216675-0.0000.0739No
179STAT316700-0.0000.0726No
180CXCL1016736-0.0000.0706No
181CXCL1116737-0.0000.0706No
182RNF21316929-0.0000.0599No
183CMKLR116947-0.0000.0589No
184SOCS317241-0.0000.0425No
185PDE4B17242-0.0000.0425No
186SOCS117268-0.0000.0411No
187HLA-DRB117420-0.0000.0326No
188PELI117495-0.0000.0285No
189IFI3017723-0.0000.0157No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE